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Hypercoagulable states

Benign Hematology·Thrombosis & Anticoagulation·2026
Hypercoagulable states

Virchow triad, pathogenesis of thrombosis

  • 1. Endothelial injury / dysfunction: trauma, surgery, smoking, atherosclerosis, indwelling lines, vasculitis, sepsis.
  • 2. Stasis / venous flow disturbance: immobility, surgery, hospitalization, paralysis, pregnancy, obesity, congestive heart failure, atrial fibrillation.
  • 3. Hypercoagulability: inherited thrombophilias, acquired conditions (cancer, antiphospholipid syndrome, OCPs/HRT, pregnancy, MPNs, PNH, nephrotic syndrome, IBD, smoking).

Inherited thrombophilias

  • Factor V Leiden (FVL): Arg506Gln; ~5% Caucasian; ~3 to 7-fold ↑ VTE heterozygous; ~18-fold homozygous (older estimates up to 80-fold).
  • Prothrombin G20210A (PGM): ~2% Caucasian; ~3-fold ↑ VTE heterozygous; homozygous rare with increased but poorly quantified risk.
  • Protein C deficiency: autosomal dominant; type I quantitative or II dysfunctional; 4 to 8-fold ↑ VTE; neonatal purpura if homozygous.
  • Protein S deficiency: autosomal dominant; type I (↓ total and free), II (normal antigen, ↓ activity), III (normal total, ↓ free); 2 to 8-fold ↑ VTE.
  • Antithrombin (AT) deficiency: most thrombotic (10-fold ↑ VTE); type I quantitative or II dysfunctional; heparin resistance hallmark.

Inherited thrombophilias, mechanism and how to test

  • Factor V Leiden (FVL): Arg506Gln substitution makes factor Va resistant to cleavage by activated protein C (APC). Test with APC resistance functional assay, confirm with genetic testing (PCR) if positive. Warfarin / DOACs do not affect mutation testing. FVL accounts for >90% of APC resistance (others: FV Cambridge, Liverpool, Bonn, and Nara mutations, protein S deficiency, APLS, pregnancy, and cancer).
  • Prothrombin G20210A: 3' UTR mutation increases prothrombin (factor II) levels ~30%. Genetic test by PCR (no functional assay); do not check antigen or activity levels.
  • Antithrombin deficiency: type I (low antigen + activity); type II (low activity, normal antigen, defective protein). Acute thrombosis and acute heparin can lower AT, so re-check at 2 to 4 weeks off heparin.
  • Protein C / S deficiency: type I (low antigen + activity); type II (normal antigen, low activity). Low free protein S more sensitive than total. Acute thrombosis, warfarin, OCPs, pregnancy, liver disease can lower levels.
  • Coagulation factor levels do not correlate with mutation: e.g., FVL patients have normal factor V level and activity.

The "Seven strong thrombophilias" framework

  • Strong (high-risk) thrombophilias that may justify long-term anticoagulation:
  • 1. Antiphospholipid syndrome (APS), especially triple-positive.
  • 2. Antithrombin deficiency.
  • 3. Protein C deficiency.
  • 4. Protein S deficiency.
  • 5. Homozygous factor V Leiden.
  • 6. Homozygous prothrombin G20210A.
  • 7. Compound heterozygous FVL + prothrombin G20210A.

Relative risk of first VTE and of recurrence by thrombophilia

Thrombophilias: relative risk of first VTE and recurrence
ThrombophiliaRR increase for first VTERR for recurrence
No thrombophiliaReference group (RR 1)
Prothrombin G20210A, heterozygous

ASH-SEP: RR 2 to 3

ASH review: 3.8 (3.0 to 4.9)

1.45 (0.96 to 2.21), not significant
FVL, heterozygous

ASH-SEP: RR 3 to 5

ASH review: 4.9 (4.1 to 5.9)

1.56 (1.14 to 2.12), statistically significant but modest
Prothrombin G20210A, homozygousInsufficient dataInsufficient data
FVL, homozygous

ASH-SEP: RR 18

ASH review: 18 (4.1 to 41)

  • 2.65 (1.18 to 5.97) Segal, JAMA 2009
  • 1.2 (0.50 to 2.6) Lijfering, Circulation 2010
  • Remained an increased recurrence risk factor on subsequent meta-analysis

Double: heterozygous G20210A

plus heterozygous FVL

ASH review: 20 (11.1 to 36.1)
  • 4.81 (0.50 to 46.3) Segal, JAMA 2009
  • 1.0 (0.6 to 1.9) Lijfering, Circulation 2010
  • Remained an increased recurrence risk factor on subsequent meta-analysis
Protein S deficiency

ASH-SEP: RR 1 to 10

ASH review: 30.6 (26.9 to 55.3)

  • ASH-SEP: RR 1.9 to 2.6 (AT), 1.4 to 1.8 (C), 1.0 to 1.4 (S)
  • ASH review: 2.8 (2.0 to 4.0) Lijfering, Circulation 2010
Protein C deficiency

ASH-SEP: RR 4 to 6.5

ASH review: 24.1 (13.7 to 42.4)

Antithrombin deficiency

ASH-SEP: RR 5 to 10

ASH review: 28.2 (13.5 to 58.6)

APLS
  • APLA: 1.41 (0.99 to 2.0) Garcia, Blood, 2013
  • ACA: 1.53 (0.76 to 3.11) Garcia, Blood, 2013
  • LA: 2.83 (0.83 to 9.64) Garcia, Blood, 2013
  • APLA syndrome: ~2.0-fold Kearon, Chest, 2012

Acquired hypercoagulable states

  • Antiphospholipid syndrome (APS): ≥1 clinical + ≥1 lab criterion; triple-positive (LA + aCL + aβ2GPI) = highest risk; warfarin INR 2 to 3 (DOACs failed).
  • Myeloproliferative neoplasm (MPN): JAK2 V617F (PV ~95%, plus exon 12; ET/PMF ~50 to 60%); CALR or MPL drive ET/PMF, not PV; high thrombotic risk; cytoreductive + aspirin ± anticoagulation.
  • Paroxysmal nocturnal hemoglobinuria (PNH): complement-mediated hemolysis; thrombosis (esp. venous/hepatic, Budd-Chiari) even with normal Plt; complement inhibition is central to reducing thrombosis; primary anticoagulant prophylaxis is individualized, not routine.
  • Heparin-induced thrombocytopenia (HIT): type II, immune; anti-PF4/H IgG, thrombocytopenia paradox + thrombosis; stop heparin, start argatroban/fondaparinux.
  • Malignancy: TF expression + microparticles, VTE; cancer itself is a high-risk VTE factor.
  • Nephrotic syndrome: ↑ fibrinogen, ↓ AT/protein S, VTE risk ↑ if serum albumin <2.5 g/dL.
  • OCP/HRT: 3 to 4-fold ↑ VTE; higher with 3rd/4th gen; avoid if inherited thrombophilia.
  • Pregnancy/postpartum: ↑ factors II, VII, VIII, X; ↓ protein S/fibrinolysis; postpartum peak weeks 1 to 6.
  • Immobilization: surgery, ICU, flights; transient ↑ VTE; reversible with mobilization.

Acquired hypercoagulability, management pearls

  • Antiphospholipid syndrome: triple-positive highest risk; warfarin INR 2 to 3.
  • MPN: risk-adapted; low-risk PV = phlebotomy + aspirin, low-risk ET = aspirin; cytoreduction + aspirin for high-risk; consider anticoagulation if prior thrombosis.
  • Malignancy: Khorana score ≥2 starting systemic therapy, consider apixaban/rivaroxaban/LMWH prophylaxis after bleeding-risk assessment; active cancer = indefinite anticoagulation if VTE.
  • Nephrotic syndrome: albumin <2.5 g/dL + proteinuria >3.5 g/day, prophylaxis consideration.
  • OCP/HRT: 3 to 4-fold ↑ VTE; counsel on contraindications + smoking cessation.
  • Postpartum (6 weeks): peak thrombotic window; prophylaxis if additional risk factors.

Risk factors for first VTE

  • Strong/major (OR >10): fracture of hip/leg, hip/knee replacement, major general surgery, major trauma, spinal cord injury, hospitalization for acute illness; previous VTE (strongest predictor of recurrent VTE).
  • Moderate (OR 2 to 9): pregnancy, postpartum, OCP/HRT, cancer, indwelling central venous catheter, chemotherapy, congestive heart failure, paralysis, thrombophilia, tamoxifen.
  • Weak (OR <2): bed rest >3 d, immobility (sitting, long-haul travel), age, obesity, varicose veins, pregnancy 1st trimester only.

Risk factors for first arterial thrombosis

  • Atherosclerotic (CV): age, smoking, HTN, hyperlipidemia, diabetes, obesity, family history.
  • Hematologic / thrombophilic (less common, especially in younger pts): APS, paradoxical embolism (PFO), hyperhomocysteinemia, MPN with thrombocytosis, PNH, HIT, vasculitis, sickle cell, severe inherited thrombophilia.

Who NOT to test for thrombophilia (generally)

  • Provoked first VTE with transient risk factor (surgery, trauma, hospitalization, immobility, OCP/HRT, pregnancy): testing rarely changes management (anticoagulate at least 3 months; for pregnancy-associated VTE continue through pregnancy and at least 6 weeks postpartum).
  • Active malignancy: cancer drives thrombosis; thrombophilia testing does not change anticoagulation duration.
  • Inflammatory bowel disease (active): IBD itself drives thrombosis.
  • Myeloproliferative disorders: test for JAK2 if not already known; not for inherited thrombophilias.
  • HIT with thrombosis: diagnose HIT; inherited thrombophilias do not change management.
  • Retinal vein occlusion (including the preeclampsia setting): not associated with inherited thrombophilias.
  • Routine screening of asymptomatic relatives: controversial; counseling about provocation avoidance is reasonable; routine prophylaxis not recommended.

When to consider thrombophilia testing

  • Unprovoked VTE in a young patient (<45).
  • Strong family history of VTE (especially first-degree relatives at young ages).
  • Recurrent VTE.
  • Unusual sites (cerebral, splanchnic, hepatic vein, upper extremity unprovoked).
  • Pregnancy losses (recurrent, APS).
  • Warfarin-induced skin necrosis (protein C deficiency).
  • Purpura fulminans in a newborn (homozygous protein C or S deficiency).

Thrombophilia tests for VTE, what to order

  • Factor V Leiden mutation and activated protein C resistance.
  • Prothrombin G20210A mutation.
  • Protein C activity.
  • Protein S activity, free protein S antigen.
  • Antithrombin activity.
  • Anticardiolipin IgG and IgM antibodies.
  • Anti-β2-glycoprotein I IgG and IgM antibodies.
  • Lupus anticoagulant.
  • Hemoglobin, platelet count, JAK2 V617F and PNH (in splanchnic vein thrombosis).
  • Lipoprotein(a) (in pediatrics).

How to test (timing matters)

  • Tests largely NOT influenced by anticoagulation (start with these; clotting-based lupus anticoagulant is the exception, see below):
    • Lupus anticoagulant (LA): clotting-based, so it IS affected by heparin, warfarin, and DOACs (false positives); interpret with caution (see below).
    • Anti-cardiolipin and anti-β2GPI antibodies.
    • Factor V Leiden (genetic; APC resistance assay can be affected by DOAC).
    • Prothrombin G20210A (genetic).
  • Tests AFFECTED by anticoagulation (defer 2 to 4 weeks off therapy):
    • Protein C and S activity (warfarin lowers; DOAC may artifactually elevate).
    • Antithrombin activity (heparin lowers).
    • Functional clotting-based LA tests (DOAC interferes, can be falsely positive).
    • Factor levels do NOT correlate with mutation; e.g., FVL patients have normal factor V level/activity.

Protein C, S, and AT: activity testing and acquired deficiency

  • Check protein C, S, and AT activity; free protein S antigen can be added. Antigen level alone can miss patients with normal antigen but low activity (type II). Diagnose by functional activity, not routine mutation testing (protein C has >100 variants, protein S similar); reserve selective gene testing for a confirmed deficiency when it will guide management or family evaluation.
  • Acquired causes of low levels:
    • Liver disease (C, S, AT): ↓ synthesis.
    • Warfarin therapy (C, S): ↓ levels.
    • Estrogens, pregnancy (S): ↓ levels.
    • Inflammatory diseases (S): ↓ levels.
    • Heparin therapy (AT): ↓.
    • Acute thrombosis (S, AT): ↓.
    • DOACs: ↑ C and S activity (falsely elevated).
  • Protein S activity is typically low on estrogens (OCP, pregnancy, post-menopausal hormone therapy), during acute thrombosis, on warfarin, and with liver disease; this does not reflect inherited deficiency. Warfarin must be discontinued for ≥3 weeks before reliable protein S levels can be obtained.
  • Treatment: AT concentrate is very rarely used; protein C concentrate for severe neonatal protein C deficiency (very rare).

Intermediate-risk thrombophilia workup algorithm

  • In the intermediate-risk group, at about 3 months on anticoagulation check D-dimer and start the thrombophilia workup with tests not influenced by anticoagulation (antiphospholipid antibodies: anticardiolipin and anti-β2GPI; FVL; and prothrombin G20210A).
  • If those are negative, D-dimer is low, and provoking factors, recurrence history, and bleeding risk favor stopping, stop anticoagulation, recheck D-dimer in 4 weeks, and complete the workup with protein C, protein S, AT activity, and lupus anticoagulant.
  • Base duration on provoking factors, recurrence history, and bleeding risk; negative thrombophilia testing and low D-dimer do not establish that stopping is safe after unprovoked VTE. If D-dimer is positive while on anticoagulation, or becomes positive during the 4-week off-therapy window, continue long-term anticoagulation.

D-dimer in management

  • After VTE provoked by a major transient risk factor: stop anticoagulation at 3 months; D-dimer is not needed for this decision.
  • After unprovoked VTE: D-dimer ~4 weeks AFTER stopping anticoagulation; if elevated, consider resuming (PROLONG). Note HERDOO2/REVERSE used D-dimer measured while ON anticoagulation.

Special populations

  • Pregnancy + inherited thrombophilia: risk varies by mutation. AT deficiency, homozygous FVL, and combined defects, high risk, LMWH prophylaxis throughout pregnancy + 6 weeks postpartum. Heterozygous FVL or PT G20210A alone, individualized.
  • Recurrent pregnancy loss + APS: prophylactic LMWH + low-dose ASA throughout pregnancy.
  • Women considering OCP/HRT with FH of VTE: weigh risk versus benefit; do not routinely screen for thrombophilia before OCP based on family history of VTE alone when the familial defect is unknown; consider selective testing only for a known high-risk familial deficiency (AT, protein C, protein S) that would change estrogen use.

High yield

  • Provoked VTE, 3 months, stop. Do not test for thrombophilia.
  • Unprovoked VTE, assess bleeding risk. If low, consider indefinite anticoagulation. Thrombophilia testing rarely changes duration.
  • Triple-positive APS = warfarin (target INR 2 to 3); DOACs inferior (TRAPS trial).
  • Antithrombin deficiency: "heparin resistance", give AT concentrate or FFP.
  • Protein C deficiency: warfarin-induced skin necrosis. Bridge with heparin.
  • Lupus anticoagulant prolongs aPTT in vitro but causes thrombosis in vivo.
  • Hyperhomocysteinemia: B vitamin replacement lowers homocysteine but does NOT lower VTE risk (VITRO, NORVIT, HOPE-2).
  • Catastrophic APS: anticoagulation + steroids + IVIG/PEX ± rituximab.
  • Splanchnic vein thrombosis: screen for MPN (JAK2 V617F), PNH, malignancy, cirrhosis.
  • Cerebral venous thrombosis: anticoagulate even with hemorrhagic infarct; workup OCP, pregnancy, mastoiditis, thrombophilia.
Veli Bakalov MD, Board Review Notes 2026